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Address: Otfried-Müller-Straße 10
72076 Tübingen


Founding Director

frontend.sr-only_#{element.icon}: +49 7071 29-82168
Prof. Dr. Julia Skokowa


frontend.sr-only_#{element.icon}: julia.skokowa@med.uni-tuebingen.de


Scientific coordinator

frontend.sr-only_#{element.icon}: +49 7071 29-86013
Dr. Olga Klimenkova


frontend.sr-only_#{element.icon}: Olga.Klimenkova@med.uni-tuebingen.de


AG Liebau

Portraitfoto

Prof. Dr. Stefan Liebau, MD

Institute of Neuroanatomy & Developmental Biology INDB

Address: Eberhard Karls University Tübingen
Österbergstr. 3
72074 Tübingen

Gene therapies for retinal diseases

The lab of Stefan Liebau is developing gene- and protein-based therapeutics for diseases in the retina using human iPS-based retinal organoids and organ-on-chip technologies. The main translational research directions are:

  • Correction or inactivation of gene mutations causing severe congenital retinal cell degeneration using gene editing with CRISPR nucleases: Together with Prof. Ueffing and Prof. Wissinger from the Institute for ophthalmic research we have developed several CRISPR/Cas gene editing approaches for gene therapy of patients suffering from congenital retinal degeneration. 
  • Using CRISPR nucleases to model diseases: We have established various state-of-the-art methods of experimental disease modeling using CRISPR nucleases by e.g., introducing or correcting gene mutations, activating or inhibiting genes of interest, tagging of endogenous proteins by fluorescent markers. We apply the above techniques to primary cells, iPSCs, retinal organoids, organ-on-chip systems and assembloids.
  • AAV-mediated gene therapy and gene supplementation: We use our organoid platform as a screening platform for novel approaches in gene therapy and gene supplementation (Achberger et al., 2021, Pasquini et al., 2020).

GRT projects

  • CRISPR/Cas9-based gene therapy approaches for retinal diseases 
  • Evaluation of causative variants in patients with retinal degeneration using NGS-based OMICS, disease modeling in iPSCs, retinal organoids and organ-on-chip systems 
  • AAV-mediated therapeutic approaches  


 GRT expertise

  • Improved virus-free generation of human iPS cells from easy to harvest hair keratinocytes
  • Development of gene therapies for retinal diseases using CRISPR nucleases
  • Development of human organoid- and organ-on-chip based pharmacological and toxicological screening platforms
  • Disease modeling of retinal diseases using human patient-specific iPS-dferived cells and organoids
  • Mechanisms of human retina and neural development


Main GRT techniques

  • State-of-the-art gene editing approaches for primary cells and iPSCs 
  • Delivery of mRNA and AAVs 
  • Tagging of endogenous proteins using CRISPR nucleases
  • Genetic screening of various cell systems
  • In vitro modeling of neurological disorders 
  • Bioinformatic analyses of NGS data for identification of disease-causing gene mutations 
  • De novo design and functional validation of various therapeutics


Ongoing and requested funding

A total of >10 million EUR funding. Ongoing:

  • Multimodal analysis of CRB1 related retinal degeneration in human iPSC derived organoids, DFG 219.225€
  • Evaluating the role and therapeutic potential of cytoskeletal dysregulation in CRB1-linked retinal degenerations    DFG 315.000€
  • Correcting a common CRB1 mutation by RNA base editing – towards an unprecedented treatment strategy for retinal degeneration DFG 350.000€
  • Microphysiological Retina-on-chip Roche 148.000€
  • Research beyond borders/Retina Organoids Boehringer 80.000€
  • Exploration of a CLN2/TPP1 gene therapy using the retina-on-a-chip platform REGENXBIO Inc 606.012€
  • Medical Faculty of The Eberhard Karls Universität Tübingen -2x Fortüne 250.000€  


Patents

  • Microphysiological organoid culture. DE 10 2017 217 738. PCT/EP2018/076645. CA3078426A1
  • System zur Asservation von Haarproben (SKG). DE 10 2016 118 968.5. PCT/EP2017/075336.
  • LinkerSpheres, DE10 2021 132 190.5.
  • haiRNA, EP22 170 479.4

Publications

Out of 66 PubMed-listed publications: 

  • Adhesion, proliferation, and detachment of various cell types on thermoresponsive microgel coatings. Flechner M, Schaller J, Stahl M, Achberger K, Gerike S, Hannappel Y, Fu J, Jaeger M, Hellweg T, Duschl C, Uhlig K. Biotechnol Bioeng. 2022 Jul;119(7):1728-1739. doi: 10.1002/bit.28095. Epub 2022 Apr 11. PMID: 35355251 
  • Generating iPSCs with a High-Efficient, Non-Invasive Method-An Improved Way to Cultivate Keratinocytes from Plucked Hair for Reprogramming. Wüstner LS, Klingenstein M, Frey KG, Nikbin MR, Milazzo A, Kleger A, Liebau S, Klingenstein S. Cells. 2022 Jun 17;11(12):1955. doi: 10.3390/cells11121955. PMID: 35741085)
  • Human immunocompetent choroid-on-chip: a novel tool for studying ocular effects of biological drugs.Cipriano M, Schlünder K, Probst C, Linke K, Weiss M, Fischer MJ, Mesch L, Achberger K, Liebau S, Mesquida M, Nicolini V, Schneider A, Giusti AM, Kustermann S, Loskill P. Commun Biol. 2022 Jan 13;5(1):52. doi: 10.1038/s42003-021-02977-3. PMID: 35027657
  • Philippi A, Heller S, Costa IG, Senée V, Breunig M, Li Z, Kwon G, Russell R, Illing A, Lin Q, Hohwieler M, Degavre A, Zalloua P, Liebau S, Schuster M, Krumm J, Zhang X, Geusz R, Benthuysen JR, Wang A, Chiou J, Gaulton K, Neubauer H, Simon E, Klein T, Wagner M, Nair G, Besse C, Dandine-Roulland C, Olaso R, Deleuze JF, Kuster B, Hebrok M, Seufferlein T, Sander M, Boehm BO, Oswald F, Nicolino M, Julier C, Kleger A. Nat Med. 2021 Nov;27(11):1928-1940. doi: 10.1038/s41591-021-01502-7. Epub 2021 Oct 18. PMID: 34663987
  • Human stem cell-based retina on chip as new translational model for validation of AAV retinal gene therapy vectors. Achberger K, Cipriano M, Düchs MJ, Schön C, Michelfelder S, Stierstorfer B, Lamla T, Kauschke SG, Chuchuy J, Roosz J, Mesch L, Cora V, Pars S, Pashkovskaia N, Corti S, Hartmann SM, Kleger A, Kreuz S, Maier U, Liebau S, Loskill P. Stem Cell Reports. 2021 Sep 14;16(9):2242-2256. doi: 10.1016/j.stemcr.2021.08.008. PMID: 34525384
  • Functional Genomic Screening During Somatic Cell Reprogramming Identifies DKK3 as a Roadblock of Organ Regeneration. Arnold F, Mahaddalkar PU, Kraus JM, Zhong X, Bergmann W, Srinivasan D, Gout J, Roger E, Beutel AK, Zizer E, Tharehalli U, Daiss N, Russell R, Perkhofer L, Oellinger R, Lin Q, Azoitei N, Weiss FU, Lerch MM, Liebau S, Katz SF, Lechel A, Rad R, Seufferlein T, Kestler HA, Ott M, Sharma AD, Hermann PC, Kleger A. Adv Sci (Weinh). 2021 May 13;8(14):2100626. doi: 10.1002/advs.202100626. eCollection 2021 Jul. PMID: 34306986
  • Integration of Electrospun Membranes into Low-Absorption Thermoplastic Organ-on-Chip. Chuchuy J, Rogal J, Ngo T, Stadelmann K, Antkowiak L, Achberger K, Liebau S, Schenke-Layland K, Loskill P. ACS Biomater Sci Eng. 2021 Jul 12;7(7):3006-3017. doi: 10.1021/acsbiomaterials.0c01062. Epub 2021 Feb 16. PMID: 33591723 
  • Using Transcriptomic Analysis to Assess Double-Strand Break Repair Activity: Towards Precise in vivo Genome Editing. Pasquini G, Cora V, Swiersy A, Achberger K, Antkowiak L, Müller B, Wimmer T, Fraschka SA, Casadei N, Ueffing M, Liebau S, Stieger K, Busskamp V. Int J Mol Sci. 2020 Feb 18;21(4):1380. doi: 10.3390/ijms21041380. PMID: 32085662
  • Merging organoid and organ-on-a-chip technology to generate complex multi-layer tissue models in a human retina-on-a-chip platform. Achberger K, Probst C, Haderspeck J, Bolz S, Rogal J, Chuchuy J, Nikolova M, Cora V, Antkowiak L, Haq W, Shen N, Schenke-Layland K, Ueffing M, Liebau S, Loskill P. Elife. 2019 Aug 27;8:e46188. doi: 10.7554/eLife.46188. PMID: 31451149
  • Reprogramming to pluripotency does not require transition through a primitive streak-like state. Raab S, Klingenstein M, Möller A, Illing A, Tosic J, Breunig M, Kuales G, Linta L, Seufferlein T, Arnold SJ, Kleger A, Liebau S. Sci Rep. 2017 Nov 29;7(1):16543. doi: 10.1038/s41598-017-15187-x. PMID: 29185460

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